Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819027.1_cds_XP_016499880.1_13759
CDS Infomation

[gene=LOC107818392] [db_xref=GeneID:107818392] [protein=autophagy-related protein 13a-like] [protein_id=XP_016499880.1] [location=complement(join(19759..20071,21826..22004,22144..23478))] [gbkey=CDS]
Sequence

ATGGATTTTCAGAATAATCCACAGGGTGAATATGGAAGGTTTGAACAGATACTTGCTCAG
TTTCTTCTAAAAACCTTGCATATTGTTTTGGACTGTAGAGTTCCTTCGATCCGACCTTAT
GGTCATAGTGGAGAGGTGAAAAAGAGTGACAAGTGGTTCAATTTGGTGTTGGGAGATCGC
CCTGCTGTTCTTGAAAATTTAAATTTTTGGCACAGAAATTTGATGGAACCAATGATAATA
GACATAATACTTGTTCAAGAGAAACCTAGTTCTTTGTCAGAGCATAGTTCCGGTACAGCA
TTCGCAGGGGCGTATACAGAAACCATCATAGAGAGGTGGGTTGTACAATATGAGTATTTG
AGGACAATGGTTCCTCAAGTTGGTGAATCTTCTTACAAGAAAACATACAAGAAATCAATT
ATACTGCTCCGCTCCCTTTATTCAATGATGAGGCTCCTTCCTGCATTCAAGGCCTTCAGG
AAACTTTCATCAACTCAGAGTTGTGACTTTGATATCATTTACAAGGTCTCTTCATTTAGT
GCTCCATTCTCCAGGGTAGAGGAGGAGTTGATGAAGCATTATACTTTTACTCCAGTTGAT
GCCCAGCAGGGCCGTTTTTCTATATCTGTGTCATATCGTGAAAATCTGTCCGACTTTAAC
CTGGAGATTGCAGCATCCTTTCCGCCTGAGATCATCACAGATTATGTAGGCAGTCCTCTT
ACTGACCCAATGAGGTCATTTCCTTCTTCCTCATCTGATAAGGATGTCCGCCCTACATCA
TTTCCGTCGAGAGGGGCACAGTCATCTTCTTCATCACCTTTCCAGCGGCCGCACAGTTGG
ACAAGTGGTTTCCTCATGTCACCTTCTTTACCTCGGACCCAGCCATATGTAGGATCTCCA
CCTTTGTACCGCACACCACATGAGCTTTCATCTTCACCTGGTGATGTATATGGGCAGAGG
GTTTCACCTAACAACAGATTGCCTATACACCACAAAGCGACGAGCTTTGATGAGTACCAG
CTTTCACCTCCATTTTCACCATCTCCATCCCCATCTCCACCCACATATTTGTCAGGAGCA
AATCCTGGGCAGAGTCGAATGCGTTCAGGAACTGGCCCTGTCAGTATCCCTCATCCAATG
ATGGGTACAAGTTCCAGATACCTATCTCCTAATTTGTCTGATCCTAACAGGCATTCTCTC
CCTCCAATGTCTCCCAGAAGCACAAAGCAGGATTCATCATCCAATGATTCCCCTTCTGGA
ATCAGGTCATTCCGGAAAATGGATCCACTAAGGACTCTAGAGTCTAATATCAGCACTATG
AGTCCTGGACAAAAGATTTCTAGAGATGCTAGAGATGATTCAGGGCGGTTCTCGGGCTTG
CTATCTTCAAGTGGTTCGCCACGTATATTTTCTAGAAGTTCTAGCAGACTGTCTTTTCAA
GATGACTTGGATGTCTTTGATTTTTCCTGTCCTTTTATTGTTGATGATGTCGATACTTCC
GATTCGCAAGTCAGTGAGAACCTTGATGGGAGAAAAGGTTCGGAAGTCTCTTCTCAAGCA
TCTGCAACAACCAGAAAATCTCAAGATGCCGCTGTAGGTGCCCTTGTTCACATGCTGAGA
ACTGCTCCTCCTCTGCGCCAAGATTCTAGCTGTTATACCTCACATAGCGTAAAGACTGAA
CAGGAGGGAGAACTTGGAACTGCATCTGGATTTTTTATCAATAGAAAGGCATCAGATGCT
CTTGAGGAGCTCAAAACTTACAAAGATTTGAAAGATCTACTACTGTCCAAGAGTGCAACC
CGTTCAGTCAGTGAGGGTGGAACTTAA

Peptide Sequence

PEP ID

XP_016499880.1
PEP Infomation

PREDICTED: autophagy-related protein 13a-like [Nicotiana tabacum]
Sequence

MDFQNNPQGEYGRFEQILAQFLLKTLHIVLDCRVPSIRPYGHSGEVKKSDKWFNLVLGDR
PAVLENLNFWHRNLMEPMIIDIILVQEKPSSLSEHSSGTAFAGAYTETIIERWVVQYEYL
RTMVPQVGESSYKKTYKKSIILLRSLYSMMRLLPAFKAFRKLSSTQSCDFDIIYKVSSFS
APFSRVEEELMKHYTFTPVDAQQGRFSISVSYRENLSDFNLEIAASFPPEIITDYVGSPL
TDPMRSFPSSSSDKDVRPTSFPSRGAQSSSSSPFQRPHSWTSGFLMSPSLPRTQPYVGSP
PLYRTPHELSSSPGDVYGQRVSPNNRLPIHHKATSFDEYQLSPPFSPSPSPSPPTYLSGA
NPGQSRMRSGTGPVSIPHPMMGTSSRYLSPNLSDPNRHSLPPMSPRSTKQDSSSNDSPSG
IRSFRKMDPLRTLESNISTMSPGQKISRDARDDSGRFSGLLSSSGSPRIFSRSSSRLSFQ
DDLDVFDFSCPFIVDDVDTSDSQVSENLDGRKGSEVSSQASATTRKSQDAAVGALVHMLR
TAPPLRQDSSCYTSHSVKTEQEGELGTASGFFINRKASDALEELKTYKDLKDLLLSKSAT
RSVSEGGT

Transcript Sequence

Gene sequence data has not been registered.